Gene: Cre08.g377200

Overview

Common name:	SRH16
Defline:	(1 of 1) PTHR10799//PTHR10799:SF788 - SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY-RELATED // CHROMODOMAIN-HELICASE-DNA-BINDING PROTEIN MI-2 HOMOLOG; SNF2-related DNA/RNA helicase
Description:	SWI/SNF chromatin remodeling complex component, ChromDB CHR345; SNF2 domain-containing protein/helicase domain-containing chromatin remodeling protein
Synonyms:	g8883.t1,SRH16
Chromosome:	chromosome 8

Protein Localization

We did not create a plasmid for this gene.

Protein-Protein Interactions

Bait ID	Bait Name	Prey ID	Prey Name	Reference
Cre06.g256850	SND1B	Cre08.g377200	SRH16	Wang et al. 2023

Mutant Strains

Insertion Junction	Mutant Strain	Insertion Junction Feature	Confidence (%)	Genome Version
CLIP2.011988_1	CLIP2.011988	intron	80	6.1
CLIP2.011988_2	CLIP2.011988	intron	80	6.1
CLIP2.018093_1	CLIP2.018093	intron	80	6.1
CLIP2.018093_2	CLIP2.018093	intron	80	6.1
CLIP2.039934_1	CLIP2.039934	intron	80	6.1
CLIP2.039934_2	CLIP2.039934	intron	80	6.1
CLIP2.049886_1	CLIP2.049886	intron	80	6.1
CLIP2.049886_2	CLIP2.049886	intron	80	6.1
CLIP2.052281_1	CLIP2.052281	intron	80	6.1
CLIP2.052281_2	CLIP2.052281	intron	80	6.1
LMJ.RY0402.043053_1	LMJ.RY0402.043053	intron	73	5.5
LMJ.RY0402.078549_2	LMJ.RY0402.078549	intron	58	5.5
LMJ.RY0402.080229_1	LMJ.RY0402.080229	CDS	95	5.5
LMJ.RY0402.080229_2	LMJ.RY0402.080229	CDS	95	5.5
LMJ.RY0402.081553_1	LMJ.RY0402.081553	intron	73	5.5
LMJ.RY0402.101559_1	LMJ.RY0402.101559	3'UTR	73	5.5
LMJ.RY0402.132818_1	LMJ.RY0402.132818	intron	95	5.5
LMJ.RY0402.132818_2	LMJ.RY0402.132818	intron	95	5.5
LMJ.RY0402.232868_1	LMJ.RY0402.232868	3'UTR	73	5.5
LMJ.RY0402.244876_2	LMJ.RY0402.244876	3'UTR	73	5.5

Gene Annotations

PFAM:	PF00271, PF00385, PF00628, PF04851, PF06461
PANTHER:	PTHR10799 PTHR10799:SF788
KEGG_ec:	EC:3.6.4.12
KEGG_orthology:	K11643
KOG:	KOG0383
Gene ontology terms::	GO:0003677, GO:0005515, GO:0005524, GO:0008270, GO:0016787
Best arabidopsis TAIR name:	AT2G25170
Best arabidopsis TAIR symbol:	CHD3,CHR6,GYM,PKL,SSL2
Best arabidopsis TAIR defline:	chromatin remodeling factor CHD3 (PICKLE)
Phytozome Locus Page

Phenotypes

Our phenotype screens did not find statistically significant results for this gene.