Insertion junction: CLIP2.052281_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.052281
Chromosome:chromosome 8
Location:3266856
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g377200 SRH16 (1 of 1) PTHR10799//PTHR10799:SF788 - SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY-RELATED // CHROMODOMAIN-HELICASE-DNA-BINDING PROTEIN MI-2 HOMOLOG; SNF2-related DNA/RNA helicase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTCGTTTCAAACATAAATGATGCCATGACCCAGAACCAGCCCACAGGGC
Internal bar code:GTGTCGAATCTGCGTGGCGGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:302
LEAP-Seq percent confirming:90.9091
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:TGCACATGAATGGCTGACCT
Suggested primer 2:TCTATGCGCATGTAGCCCAG