Insertion junction: CLIP2.049951_3

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.049951
Chromosome:chromosome 17
Location:2182997
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g712450 (1 of 2) PF08585 - RecQ mediated genome instability protein (RMI1_N) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGTCCTGCACACACCATGGTGTCCGTCCGCCACTACATTACCCGAAGCCA
Internal bar code:AAGTCCAAGATATATGGACAAC

Confirmation - LEAP-Seq

LEAP-Seq distance:703
LEAP-Seq percent confirming:65.9574
LEAP-Seq n confirming:31
LEAP-Seq n nonconfirming:16
LEAP-Seq n unique pos:47

Suggested primers for confirmation by PCR

Suggested primer 1:CGGTGAACTGTGCTTTGGTG
Suggested primer 2:GTTAACATGGTCGAGGCCCA