Gene: Cre17.g712450

Overview

Common name:
Defline:(1 of 2) PF08585 - RecQ mediated genome instability protein (RMI1_N)
Description:
Synonyms:g17252.t1
Chromosome:chromosome 17

Protein Localization

We did not create a plasmid for this gene.

Protein-Protein Interactions

We did not determine any protein-protein interactions for this gene.

Mutant Strains

Insertion Junction Mutant Strain Insertion Junction Feature Confidence (%) Genome Version
CLIP2.016748_1 CLIP2.016748 3'UTR_intron 80 6.1
CLIP2.016748_2 CLIP2.016748 3'UTR_intron 80 6.1
CLIP2.029472_1 CLIP2.029472 CDS 80 6.1
CLIP2.029472_2 CLIP2.029472 CDS 80 6.1
CLIP2.038281_1 CLIP2.038281 intron 80 6.1
CLIP2.039914_1 CLIP2.039914 CDS 80 6.1
CLIP2.049951_2 CLIP2.049951 3'UTR 80 6.1
CLIP2.049951_3 CLIP2.049951 3'UTR 80 6.1
CLIP2.058809_1 CLIP2.058809 3'UTR 40 6.1
CLIP2.061731_1 CLIP2.061731 3'UTR 80 6.1
CLIP2.061731_2 CLIP2.061731 3'UTR 80 6.1
CLIP2.064693_1 CLIP2.064693 5'UTR 40 6.1
CLIP2.067185_1 CLIP2.067185 3'UTR 80 6.1
LMJ.RY0402.052153_1 LMJ.RY0402.052153 3'UTR 73 5.5
LMJ.RY0402.091554_2 LMJ.RY0402.091554 CDS 73 5.5
LMJ.RY0402.092047_1 LMJ.RY0402.092047 3'UTR 95 5.5
LMJ.RY0402.092047_2 LMJ.RY0402.092047 3'UTR 95 5.5
LMJ.RY0402.145078_1 LMJ.RY0402.145078 intron 73 5.5
LMJ.RY0402.157829_1 LMJ.RY0402.157829 CDS 95 5.5
LMJ.RY0402.157829_2 LMJ.RY0402.157829 CDS 95 5.5
LMJ.RY0402.158801_3 LMJ.RY0402.158801 intron 73 5.5
LMJ.RY0402.168808_1 LMJ.RY0402.168808 intron 73 5.5
LMJ.RY0402.179215_1 LMJ.RY0402.179215 3'UTR 58 5.5
LMJ.RY0402.179215_2 LMJ.RY0402.179215 3'UTR 58 5.5
LMJ.RY0402.180066_1 LMJ.RY0402.180066 3'UTR 58 5.5
LMJ.RY0402.180559_2 LMJ.RY0402.180559 CDS 58 5.5
LMJ.RY0402.184292_1 LMJ.RY0402.184292 CDS 73 5.5
LMJ.RY0402.227184_1 LMJ.RY0402.227184 intron 95 5.5
LMJ.RY0402.227184_2 LMJ.RY0402.227184 intron 95 5.5
LMJ.RY0402.249524_1 LMJ.RY0402.249524 3'UTR 95 5.5
LMJ.RY0402.249524_2 LMJ.RY0402.249524 3'UTR 95 5.5
LMJ.RY0402.255426_1 LMJ.RY0402.255426 CDS 95 5.5
LMJ.RY0402.255426_2 LMJ.RY0402.255426 CDS 95 5.5

Gene Annotations

PFAM:PF08585
PANTHER: PTHR14790
KEGG_ec:
KEGG_orthology:
KOG:
Gene ontology terms::
Best arabidopsis TAIR name:AT5G63540.1
Best arabidopsis TAIR symbol:ATRMI1,BLAP75,RMI1
Best arabidopsis TAIR defline:Domain of unknown function (DUF1767)
Phytozome Locus Page

Phenotypes

Mutants in this gene exhibit a phenotype under the following conditions:

Cisplatin, screen 2 of 4 ( 98% confidence (FDR = 0.012))
Cisplatin, screen 3 of 4 ( 99% confidence (FDR = 0.0044))
Cisplatin, screen 4 of 4 ( 75% confidence (FDR = 0.25))
Methyl methanesulfonate, screen 4 of 4 ( 90% confidence (FDR = 0.095))

Note: FDR indicates the likelihood that a particular genotype-phenotype relationship is incorrect. Not all mutants in a particular gene show the same phenotype. Please see the mutant pages for each mutant's phenotypes. Complementation is needed to definitively prove a genotype-phenotype link. These data are from a pooled phenotyping experiment.

If you reference the phenotypic data above in a manuscript, please cite: Fauser et al. 2022 Nature Genetics.