Insertion junction: CLIP2.061731_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.061731
Chromosome:chromosome 17
Location:2182137
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g712400 TERC1,TERC Thylakoid protein integration factor; (1 of 1) PTHR30238:SF0 - PROTEIN PIGMENT DEFECTIVE 149 3'UTR
Cre17.g712450 (1 of 2) PF08585 - RecQ mediated genome instability protein (RMI1_N) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACCACTCAATGGGCCTCGACCATGTTAACAGCAAGCACACGTCATCAGC
Internal bar code:GGTTTCTACGGAAAAGAGGTCG

Confirmation - LEAP-Seq

LEAP-Seq distance:5235
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:117
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:117

Suggested primers for confirmation by PCR

Suggested primer 1:GCATGGACTGAAGCTGACCT
Suggested primer 2:GTAATCGCCGCCTTACAGGA