Insertion junction: CLIP2.049983_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.049983
Chromosome:chromosome 6
Location:3005662
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g274350 HTR5,HTR29 Histone H3; (1 of 35) K11253 - histone H3 (H3) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAAGTACCAGAAGTCGACTGAGCTGCTGATCCGCAAGCTGCCATTCCAGC
Internal bar code:CGTTCGGCGCTCGGCTTGGTTT

Confirmation - LEAP-Seq

LEAP-Seq distance:2645
LEAP-Seq percent confirming:92.8571
LEAP-Seq n confirming:39
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:42

Suggested primers for confirmation by PCR

Suggested primer 1:GCATAGTGGACGCATCAGGA
Suggested primer 2:CTTGGTGATGCCCTGGATGT