Insertion junction: CLIP2.050070_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.050070
Chromosome:chromosome 12
Location:8163129
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g552050 (1 of 11) PF13229 - Right handed beta helix region (Beta_helix) CDS
lncRNA_TCONS_00119430 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TATCCAGAGCGCCAGCAACCTGCCCTCGGCAAAGCCCAGCGGCGGCGCCA
Internal bar code:TGTCCGACCACCGACCGGTAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:464
LEAP-Seq percent confirming:55.5556
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:GGAACGAGCCCATTTGCATC
Suggested primer 2:TATATACCGGGCGGGAGGAG