Insertion junction: CLIP2.050070_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.050070
Chromosome:chromosome 12
Location:8163134
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g552050 (1 of 11) PF13229 - Right handed beta helix region (Beta_helix) CDS
lncRNA_TCONS_00119430 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCTGGGGGGCCGTTGCGGCCCCGGGAGGGGGCCCGGCCATACGCGGGCA
Internal bar code:CTCACAGATAATTATTGTTCCG

Confirmation - LEAP-Seq

LEAP-Seq distance:981
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:TATATACCGGGCGGGAGGAG
Suggested primer 2:GGAACGAGCCCATTTGCATC