Insertion junction: CLIP2.050251_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.050251
Chromosome:chromosome 12
Location:1353456
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g489150 SHD1 SH2-domain protein; (1 of 2) IPR000980 - SH2 domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGTCCTGCTGTGTCAGGACGTGCGCCCGCAGCGTCAACGGCAGCGAAAA
Internal bar code:GAGTCAATTGAGGCTCTGAGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:2813
LEAP-Seq percent confirming:51.7241
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:14
LEAP-Seq n unique pos:29

Suggested primers for confirmation by PCR

Suggested primer 1:GTTCCGCCTCAACACAACAC
Suggested primer 2:TACCGTACGAATCAGCCAGC