Insertion junction: CLIP2.050412_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.050412
Chromosome:chromosome 16
Location:1231861
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre16.g650900 (1 of 1) IPR000104//IPR001965//IPR011011//IPR017956 - Antifreeze protein, type I // Zinc finger, PHD-type // Zinc finger, FYVE/PHD-type // AT hook, DNA-binding motif 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGCTAACCTGCGTGCTGTATTTCTGTTGTCAATTGAGCCGCTGTCGTGC
Internal bar code:GGTGTGGATCATCTGCTTATAC

Confirmation - LEAP-Seq

LEAP-Seq distance:849
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:1

Suggested primers for confirmation by PCR

Suggested primer 1:TGGCAGGGATGTCAGGGATA
Suggested primer 2:CAGACAGAGTGGTTGGGCAT