Insertion junction: CLIP2.050499_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.050499
Chromosome:chromosome 17
Location:3875752
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g727600 (1 of 1) PF06650//PF12624//PF16908//PF16909 - SHR-binding domain of vacuolar-sorting associated protein 13 (SHR-BD) // N-terminal region of Chorein or VPS13 (Chorein_N) // Vacuolar sorting-associated protein 13, N-terminal (VPS13) // Vacuolar-sorting-associated 13 protein C-terminal (VPS13_C) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGAAGAGGCTTGGCGAATTACAGCAGAGAGCTTCAGGCGTCGGGAGCTC
Internal bar code:CGCTTTAGCAAGTGGGTTATAC

Confirmation - LEAP-Seq

LEAP-Seq distance:1110
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:CGCATGAGCCAGACCTATCC
Suggested primer 2:GAGCTGATAACGTGGAGCGA