Insertion junction: CLIP2.050625_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.050625
Chromosome:chromosome 2
Location:3952777
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g102350 ATG3,APG3 Autophagy-related protein; (1 of 1) K08343 - ubiquitin-like-conjugating enzyme ATG3 (ATG3) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGTAAAGCTCTGTATTAGGCAGATACCGTATCCCGTGGGCACGCACCGTT
Internal bar code:AGGGGGTCTTCTCGTCACCCGA

Confirmation - LEAP-Seq

LEAP-Seq distance:3806
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:84
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:84

Suggested primers for confirmation by PCR

Suggested primer 1:CGAGTACGATGCTGGCTCAT
Suggested primer 2:CTCCATCCCGCACCATCTAC