Insertion junction: CLIP2.050777_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.050777
Chromosome:chromosome 10
Location:1600769
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g429100 Putative prolyl-tRNA synthetase; (1 of 1) PTHR11451:SF21 - BIFUNCTIONAL GLUTAMATE/PROLINE--TRNA LIGASE CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTGCTTCTTCGATCCCGAAAGAGACAGGAAAGCCCGCGCGAGCATACAC
Internal bar code:TCAATACATAATGCGATTTGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:2032
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:34
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:34

Suggested primers for confirmation by PCR

Suggested primer 1:CTCTATGGCACTCGCGATGT
Suggested primer 2:GTGGTGGTATTCTGCTGGCT