Insertion junction: CLIP2.050834_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.050834
Chromosome:chromosome 12
Location:4418781
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g520000 (1 of 2) PF00023//PF12796//PF13920 - Ankyrin repeat (Ank) // Ankyrin repeats (3 copies) (Ank_2) // Zinc finger, C3HC4 type (RING finger) (zf-C3HC4_3) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCGCGCAATGGCCTAGAGCTTTTGAAGACGCACAACTGGAGCGAACAGA
Internal bar code:TTAAAGGAAGAGGGAGTTGGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:1459
LEAP-Seq percent confirming:85.7143
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:GCAACTTGGTTCACACGCAT
Suggested primer 2:CCAACAACTTTGCGGAGTGG