Insertion junction: CLIP2.050983_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.050983
Chromosome:chromosome 12
Location:3154580
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g500500 SMT1,SMT2,STM1 (1 of 1) 2.1.1.143 - 24-methylenesterol C-methyltransferase / SMT(2); Sterol-C24-methyltransferase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTTCATTCGCACCGCAGCTGCCAGCATACCCTGACAGCTCCTCAGCACC
Internal bar code:AAATGTACAGCTCGCCAAGATA

Confirmation - LEAP-Seq

LEAP-Seq distance:2950
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:38
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:38

Suggested primers for confirmation by PCR

Suggested primer 1:CTTTCTTCCCCATCCACCCC
Suggested primer 2:TGGTGGACGTGTTCTACAGC