Insertion junction: CLIP2.051180_3

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.051180
Chromosome:chromosome 3
Location:4617048
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g176833 NAP1,NAP,DII5 (1 of 7) PF00022 - Actin (Actin); Novel actin protein 1 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCCGTCCAACACAGTGCAGGCGTGACAACCCCTTGTGGTCGTCACAAGA
Internal bar code:AACTTGCACATGAGTACCAAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:334
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:CTCCCTCAACCCTCGTTTCC
Suggested primer 2:ACGGGTTGTGGTCATTGTGA