Insertion junction: CLIP2.051218_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.051218
Chromosome:chromosome 6
Location:3005554
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g274350 HTR5,HTR29 Histone H3; (1 of 35) K11253 - histone H3 (H3) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCTTGCCGCCGGTGGACTTGCGGGCAGTCTGCTTGGTGCGGGCCATTTT
Internal bar code:ATGTGTCTTGAAGTTTTTTCAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1699
LEAP-Seq percent confirming:51.4286
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:17
LEAP-Seq n unique pos:35

Suggested primers for confirmation by PCR

Suggested primer 1:CTTGGTGATGCCCTGGATGT
Suggested primer 2:GCATAGTGGACGCATCAGGA