Insertion junction: CLIP2.051356_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.051356
Chromosome:chromosome 5
Location:1362427
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g234600 (1 of 100) IPR001810 - F-box domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAAGGGACCAAACGACGCCTCTATCGAGTGAGCAATGCGACTTGGCTCAT
Internal bar code:ATAGGATTTTAGTGTTGAGAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1163
LEAP-Seq percent confirming:92.8571
LEAP-Seq n confirming:26
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:28

Suggested primers for confirmation by PCR

Suggested primer 1:GATTCCTAGCTCCTCGTCGC
Suggested primer 2:CGAAGTTGTCAGGAACGGGA