Insertion junction: CLIP2.051476_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.051476
Chromosome:chromosome 7
Location:3467918
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g335700 intron
Cre07.g335750 IFT88 (1 of 1) K16474 - intraflagellar transport protein 88 (IFT88); Intraflagellar Transport Protein 88 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGCTAATTGGGGGACGGCACGCGTCTACCCACACCCTCTCTCCCCCGACC
Internal bar code:TATGAAAGGGATAACCATACCG

Confirmation - LEAP-Seq

LEAP-Seq distance:1135
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:26
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:AGGAGTACAGATGGGGCCAT
Suggested primer 2:TTTACCTACAGGCAGGCAGC