Insertion junction: CLIP2.051671_4

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.051671
Chromosome:chromosome 17
Location:3782009
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g726850 (1 of 3) K11089 - 60 kDa SS-A/Ro ribonucleoprotein (TROVE2, SSA2); Similar to Sjogren Syndrome Antigen A2 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCAATGTATTGACGGTCCCTTAAAATGGCCAGCGAAGGCCCCCAATCTG
Internal bar code:ATGCGTCAGGTATCGGATTATC

Confirmation - LEAP-Seq

LEAP-Seq distance:1374
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:GGTCATCATCTAGGCGGGTG
Suggested primer 2:GTATCCGGATGCCCAGTCAG