Insertion junction: CLIP2.051701_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.051701
Chromosome:chromosome 1
Location:4193997
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g028200 DBP2,HEL6 (1 of 1) PTHR24031:SF219 - ATP-DEPENDENT RNA HELICASE DDX5-RELATED; DEAD-box RNA helicase CDS
Cre01.g028250 GEA1 Putative lysophospholipase, glycerol-ester acylhydrolase; (1 of 1) 3.1.1.23//3.1.1.3 - Acylglycerol lipase / Monoacylglycerol lipase // Triacylglycerol lipase / Triglyceride lipase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAAAGCCTCCGCCTCCGCCTCCACCGCCGTGACCTCCACTGTCCCATCGC
Internal bar code:CGTGAGGGGGTGGGTGTACGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1763
LEAP-Seq percent confirming:80.9524
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:GTTACAGTTCGCATCACCGC
Suggested primer 2:TCCTCAAACGTCTTCACCGG