Common name: | DBP2,HEL6 |
Defline: | (1 of 1) PTHR24031:SF219 - ATP-DEPENDENT RNA HELICASE DDX5-RELATED; DEAD-box RNA helicase |
Description: | homology to Saccharomyces cerevisiae Dbp2p: essential ATP-dependent RNA helicase of the DEAD-box protein family, involved in nonsense-mediated mRNA decay and rRNA processing |
Synonyms: | g644.t2,DBP2,HEL6 |
Chromosome: | chromosome 1 |
We did not create a plasmid for this gene.
We did not determine any protein-protein interactions for this gene.
Insertion Junction | Mutant Strain | Insertion Junction Feature | Confidence (%) | Genome Version |
---|---|---|---|---|
CLIP2.012460_1 | CLIP2.012460 | intron | 80 | 6.1 |
CLIP2.012460_2 | CLIP2.012460 | intron | 80 | 6.1 |
CLIP2.027710_1 | CLIP2.027710 | intron | 80 | 6.1 |
CLIP2.027710_2 | CLIP2.027710 | intron | 80 | 6.1 |
CLIP2.030545_1 | CLIP2.030545 | intron | 80 | 6.1 |
CLIP2.030545_2 | CLIP2.030545 | intron | 80 | 6.1 |
CLIP2.031513_1 | CLIP2.031513 | 3'UTR | 80 | 6.1 |
CLIP2.034158_1 | CLIP2.034158 | CDS | 80 | 6.1 |
CLIP2.034158_2 | CLIP2.034158 | CDS | 80 | 6.1 |
CLIP2.051701_1 | CLIP2.051701 | CDS | 80 | 6.1 |
CLIP2.052565_1 | CLIP2.052565 | intron | 80 | 6.1 |
CLIP2.064340_1 | CLIP2.064340 | 5'UTR | 80 | 6.1 |
CLIP2.064340_2 | CLIP2.064340 | 5'UTR | 80 | 6.1 |
LMJ.RY0402.058482_1 | LMJ.RY0402.058482 | 3'UTR | 95 | 5.5 |
LMJ.RY0402.058482_2 | LMJ.RY0402.058482 | 3'UTR | 95 | 5.5 |
LMJ.RY0402.161841_1 | LMJ.RY0402.161841 | 3'UTR | 95 | 5.5 |
LMJ.RY0402.161841_2 | LMJ.RY0402.161841 | 3'UTR | 95 | 5.5 |
LMJ.RY0402.228111_1 | LMJ.RY0402.228111 | intron | 95 | 5.5 |
LMJ.RY0402.228111_2 | LMJ.RY0402.228111 | intron | 95 | 5.5 |
PFAM: | PF00270, PF00271 |
PANTHER: | PTHR24031 PTHR24031:SF219 |
KEGG_ec: | EC:3.6.4.13 |
KEGG_orthology: | K12823 |
KOG: | KOG0331 |
Gene ontology terms:: | GO:0003676, GO:0005524 |
Best arabidopsis TAIR name: | AT5G63120 |
Best arabidopsis TAIR symbol: | |
Best arabidopsis TAIR defline: | P-loop containing nucleoside triphosphate hydrolases superfamily protein |
Phytozome Locus Page |
Our phenotype screens did not find statistically significant results for this gene.