Gene: Cre01.g028200

Overview

Common name:DBP2,HEL6
Defline:(1 of 1) PTHR24031:SF219 - ATP-DEPENDENT RNA HELICASE DDX5-RELATED; DEAD-box RNA helicase
Description:homology to Saccharomyces cerevisiae Dbp2p: essential ATP-dependent RNA helicase of the DEAD-box protein family, involved in nonsense-mediated mRNA decay and rRNA processing
Synonyms:g644.t2,DBP2,HEL6
Chromosome:chromosome 1

Protein Localization

We did not create a plasmid for this gene.

Protein-Protein Interactions

We did not determine any protein-protein interactions for this gene.

Mutant Strains

Insertion Junction Mutant Strain Insertion Junction Feature Confidence (%) Genome Version
CLIP2.012460_1 CLIP2.012460 intron 80 6.1
CLIP2.012460_2 CLIP2.012460 intron 80 6.1
CLIP2.027710_1 CLIP2.027710 intron 80 6.1
CLIP2.027710_2 CLIP2.027710 intron 80 6.1
CLIP2.030545_1 CLIP2.030545 intron 80 6.1
CLIP2.030545_2 CLIP2.030545 intron 80 6.1
CLIP2.031513_1 CLIP2.031513 3'UTR 80 6.1
CLIP2.034158_1 CLIP2.034158 CDS 80 6.1
CLIP2.034158_2 CLIP2.034158 CDS 80 6.1
CLIP2.051701_1 CLIP2.051701 CDS 80 6.1
CLIP2.052565_1 CLIP2.052565 intron 80 6.1
CLIP2.064340_1 CLIP2.064340 5'UTR 80 6.1
CLIP2.064340_2 CLIP2.064340 5'UTR 80 6.1
LMJ.RY0402.058482_1 LMJ.RY0402.058482 3'UTR 95 5.5
LMJ.RY0402.058482_2 LMJ.RY0402.058482 3'UTR 95 5.5
LMJ.RY0402.161841_1 LMJ.RY0402.161841 3'UTR 95 5.5
LMJ.RY0402.161841_2 LMJ.RY0402.161841 3'UTR 95 5.5
LMJ.RY0402.228111_1 LMJ.RY0402.228111 intron 95 5.5
LMJ.RY0402.228111_2 LMJ.RY0402.228111 intron 95 5.5

Gene Annotations

PFAM:PF00270, PF00271
PANTHER: PTHR24031 PTHR24031:SF219
KEGG_ec:EC:3.6.4.13
KEGG_orthology:K12823
KOG:KOG0331
Gene ontology terms::GO:0003676, GO:0005524
Best arabidopsis TAIR name:AT5G63120
Best arabidopsis TAIR symbol:
Best arabidopsis TAIR defline:P-loop containing nucleoside triphosphate hydrolases superfamily protein
Phytozome Locus Page

Phenotypes

Our phenotype screens did not find statistically significant results for this gene.