Insertion junction: CLIP2.051854_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.051854
Chromosome:chromosome 3
Location:2350670
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre03.g158250 SCY2,SECY2 (1 of 1) PTHR10906:SF2 - PREPROTEIN TRANSLOCASE SUBUNIT SCY2, CHLOROPLASTIC; Preprotein translocase secY subunit intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCTCCACGCCTGCAGCAAGAGCTGATTGCCCAGGCCCGGCTGTTGGGGC
Internal bar code:CGTTCACGTGTCGTGCTGGCTC

Confirmation - LEAP-Seq

LEAP-Seq distance:445
LEAP-Seq percent confirming:50.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:GGAGTATGGGAGTGGGGAGT
Suggested primer 2:GTCTCACTCGTCATGCCCAA