Insertion junction: CLIP2.051889_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.051889
Chromosome:chromosome 17
Location:3782534
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g726850 (1 of 3) K11089 - 60 kDa SS-A/Ro ribonucleoprotein (TROVE2, SSA2); Similar to Sjogren Syndrome Antigen A2 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AACCTATTGCCCTTCTCGCCCCCTCTCCCTTGCCCTCCTGCCCCTTCCCC
Internal bar code:TGGTTATGGCAGTATTACATTC

Confirmation - LEAP-Seq

LEAP-Seq distance:2956
LEAP-Seq percent confirming:94.4444
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:TCTCACGCTGATGTGCATGT
Suggested primer 2:CAGACCAACAACCTTGCAGC