Insertion junction: CLIP2.052019_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.052019
Chromosome:chromosome 7
Location:5618223
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g352300 (1 of 3) 2.1.1.200 - tRNA (cytidine(32)/uridine(32)-2'-O)-methyltransferase / TrMet(Xm32) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GACTTGATTGACGCCGCCAAGGTACGTGGCCGGGCCTGTGGTGGGCTCGA
Internal bar code:CTGGCAGCCGTGCTACAATTCT

Confirmation - LEAP-Seq

LEAP-Seq distance:1176
LEAP-Seq percent confirming:28.5714
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:CAAAGGCACCTCTACCAGCA
Suggested primer 2:TGCAAGGTTGGCAGCAATTC