Insertion junction: CLIP2.052172_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.052172
Chromosome:chromosome 13
Location:4619800
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g603700 DII4,NSG4,ACT1,IDA5 Actin, flagellar inner arm dynein subunit; (1 of 1) K10355 - actin, other eukaryote (ACTF) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTATTCTGACTCTGCGCTACCCCATTGAGCACGGTATTGTGACCAACTGG
Internal bar code:TAACTCTACAAAACCGGATTCG

Confirmation - LEAP-Seq

LEAP-Seq distance:627
LEAP-Seq percent confirming:66.6667
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:CTCGACCTCTCTCACCTGGA
Suggested primer 2:GGCGTGGGGACTTCCATTTA