Gene: Cre13.g603700

Overview

Common name:DII4,NSG4,ACT1,IDA5
Defline:Actin, flagellar inner arm dynein subunit; (1 of 1) K10355 - actin, other eukaryote (ACTF)
Description:Actin encoded by the IDA5 locus [gi:34581636, PMID: 9151671]; flagellar inner arm dynein subunit; present in Inner Arm Dynein species a b c d e g and some minor species
Synonyms:g14567.t1,Cre13.g603700.t1.1,ACT1,NSG4,DII4
Chromosome:chromosome 13

Protein Localization

The plasmid for this gene is not available.

Imaged strain: CSI_FC1D09

Imaging conditions: Tris-Phosphate media, air, 150 uM photons/m2/s, shaking in 96-well plate; imaged after 48 hours.

Classification(s):

cytosol/cytosol (strong signal)

If you reference these protein localization data in a manuscript, please cite: Mackinder et al. 2017.

Venus                      Venus+Chlorophyll

Protein-Protein Interactions

We did not determine any protein-protein interactions for this gene.

Mutant Strains

Insertion Junction Mutant Strain Insertion Junction Feature Confidence (%) Genome Version
CLIP2.010321_3 CLIP2.010321 intron 80 6.1
CLIP2.015703_1 CLIP2.015703 CDS 80 6.1
CLIP2.015703_2 CLIP2.015703 CDS 80 6.1
CLIP2.027418_1 CLIP2.027418 CDS 80 6.1
CLIP2.027418_2 CLIP2.027418 CDS 80 6.1
CLIP2.037752_3 CLIP2.037752 CDS 80 6.1
CLIP2.037752_4 CLIP2.037752 CDS 80 6.1
CLIP2.043627_1 CLIP2.043627 CDS 80 6.1
CLIP2.043627_2 CLIP2.043627 CDS 80 6.1
CLIP2.052172_1 CLIP2.052172 CDS 80 6.1
CLIP2.052172_2 CLIP2.052172 CDS 80 6.1
CLIP2.057442_2 CLIP2.057442 CDS 80 6.1
CLIP2.069271_2 CLIP2.069271 intron 80 6.1
CLIP2.069271_3 CLIP2.069271 intron 80 6.1
LMJ.RY0402.039013_1 LMJ.RY0402.039013 5'UTR 95 5.5
LMJ.RY0402.039013_2 LMJ.RY0402.039013 5'UTR 95 5.5
LMJ.RY0402.075210_1 LMJ.RY0402.075210 intron 58 5.5
LMJ.RY0402.087018_1 LMJ.RY0402.087018 intron 95 5.5
LMJ.RY0402.087018_2 LMJ.RY0402.087018 intron 95 5.5
LMJ.RY0402.088280_1 LMJ.RY0402.088280 CDS 95 5.5
LMJ.RY0402.088280_2 LMJ.RY0402.088280 CDS 95 5.5
LMJ.RY0402.101816_1 LMJ.RY0402.101816 CDS 73 5.5
LMJ.RY0402.121294_2 LMJ.RY0402.121294 intron 73 5.5
LMJ.RY0402.124556_1 LMJ.RY0402.124556 3'UTR 95 5.5
LMJ.RY0402.124556_2 LMJ.RY0402.124556 3'UTR 95 5.5
LMJ.RY0402.127804_1 LMJ.RY0402.127804 5'UTR/5'UTR_intron 95 5.5
LMJ.RY0402.127804_2 LMJ.RY0402.127804 CDS 95 5.5
LMJ.RY0402.136174_1 LMJ.RY0402.136174 3'UTR 73 5.5
LMJ.RY0402.145008_1 LMJ.RY0402.145008 5'UTR_intron 95 5.5
LMJ.RY0402.145008_2 LMJ.RY0402.145008 5'UTR_intron 95 5.5
LMJ.RY0402.195269_1 LMJ.RY0402.195269 intron 73 5.5
LMJ.RY0402.208800_3 LMJ.RY0402.208800 intron 73 5.5
LMJ.RY0402.235111_2 LMJ.RY0402.235111 intron 73 5.5
LMJ.RY0402.236375_1 LMJ.RY0402.236375 5'UTR 95 5.5
LMJ.RY0402.236375_2 LMJ.RY0402.236375 5'UTR 95 5.5
LMJ.RY0402.253873_2 LMJ.RY0402.253873 CDS 73 5.5

Gene Annotations

PFAM:PF00022
PANTHER: PTHR11937 PTHR11937:SF247
KEGG_ec:
KEGG_orthology:K10355
KOG:KOG0676
Gene ontology terms::
Best arabidopsis TAIR name:AT3G12110
Best arabidopsis TAIR symbol:ACT11
Best arabidopsis TAIR defline:actin-11
Phytozome Locus Page

Phenotypes

Mutants in this gene exhibit a phenotype under the following conditions:

High temperature, screen 5 of 7 ( 95% confidence (FDR = 0.048))
LAT041D08, screen 1 of 1 ( 77% confidence (FDR = 0.23))

Note: FDR indicates the likelihood that a particular genotype-phenotype relationship is incorrect. Not all mutants in a particular gene show the same phenotype. Please see the mutant pages for each mutant's phenotypes. Complementation is needed to definitively prove a genotype-phenotype link. These data are from a pooled phenotyping experiment.

If you reference the phenotypic data above in a manuscript, please cite: Fauser et al. 2022 Nature Genetics.