Insertion junction: CLIP2.052221_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.052221
Chromosome:chromosome 4
Location:1872927
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g218150 PPH1,PPP18 Thylakoid phosphoprotein phosphatase 2C-related; (1 of 70) 3.1.3.16 - Protein-serine/threonine phosphatase / Serine/threonine specific protein phosphatase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAAGAGACGGAGGGTGGGCGACCACGAGCAAGTAAACAGGCGGGGGACGG
Internal bar code:ATTAGGGTTGTCGGTAAGTAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1323
LEAP-Seq percent confirming:86.6667
LEAP-Seq n confirming:26
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:30

Suggested primers for confirmation by PCR

Suggested primer 1:CTGGTCAACAGCAAACAGGC
Suggested primer 2:GTGTCAACAAAACGGAGCCC