Insertion junction: CLIP2.052357_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.052357
Chromosome:chromosome 16
Location:6289210
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g676150 MSD3 (1 of 1) PTHR11404//PTHR11404:SF22 - SUPEROXIDE DISMUTASE 2 // 37S RIBOSOMAL PROTEIN S26, MITOCHONDRIAL; Mn superoxide dismutase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCCCGACGTGGCGCTGGGAGTGCAGGAACATGGTCTGCAGTTCGAGTCA
Internal bar code:TACCGTCTCGTTAGTTTTGGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:1808
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:49
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:49

Suggested primers for confirmation by PCR

Suggested primer 1:AAGTAATCCACCAGCCACGG
Suggested primer 2:GCCACACTGCATCAAAAGCA