Insertion junction: CLIP2.052693_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.052693
Chromosome:chromosome 4
Location:2953150
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g224750 VAM1,VAMP1,VAMP71 Endosomal R-SNARE protein, Vamp7/Nyv1-family (R.III); (1 of 3) PTHR21136//PTHR21136:SF4 - SNARE PROTEINS // N-SYNAPTOBREVIN, ISOFORM J intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCAGGATGAAGATCGTGGTGGCTCTGGCGGTCATCCTGCTGGCGGTGGTC
Internal bar code:GTGCACAGAGGCCAGGGATAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:306
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:1

Suggested primers for confirmation by PCR

Suggested primer 1:GACAAGTGCGGGGTCTTACA
Suggested primer 2:GTTCCCAGGTGGATGAGGTG