Gene: Cre04.g224750

Overview

Common name:	VAM1,VAMP1,VAMP71
Defline:	Endosomal R-SNARE protein, Vamp7/Nyv1-family (R.III); (1 of 3) PTHR21136//PTHR21136:SF4 - SNARE PROTEINS // N-SYNAPTOBREVIN, ISOFORM J
Description:	Expressed Protein, similar to VAMP7 R-SNAREs, involved in Golgi/PM and Golgi/endosomal trafficking; most similar to VAMP72-family of land plants; part of a 4-member gene family in Chlamydomonas all on same scaffold and in 2 tandem pairs, location and order of gene family members are syntenic in Volvox
Synonyms:	VAM1,g4905.t1,VAMP71,Cre04.g224750.t1.1
Chromosome:	chromosome 4

Protein Localization

We did not create a plasmid for this gene.

Protein-Protein Interactions

We did not determine any protein-protein interactions for this gene.

Mutant Strains

Insertion Junction	Mutant Strain	Insertion Junction Feature	Confidence (%)	Genome Version
CLIP2.048603_1	CLIP2.048603	3'UTR	80	6.1
CLIP2.052693_1	CLIP2.052693	intron	80	6.1
CLIP2.057386_1	CLIP2.057386	3'UTR	80	6.1
CLIP2.057386_2	CLIP2.057386	3'UTR	80	6.1
CLIP2.058571_1	CLIP2.058571	3'UTR	80	6.1
CLIP2.058571_2	CLIP2.058571	3'UTR	80	6.1
CLIP2.061793_1	CLIP2.061793	3'UTR	80	6.1
CLIP2.061793_2	CLIP2.061793	3'UTR	80	6.1
CLIP2.063660_1	CLIP2.063660	3'UTR	80	6.1
CLIP2.063660_2	CLIP2.063660	3'UTR	80	6.1
CLIP2.072531_1	CLIP2.072531	3'UTR	80	6.1
CLIP2.072531_2	CLIP2.072531	3'UTR	80	6.1
LMJ.RY0402.049544_1	LMJ.RY0402.049544	3'UTR	95	5.5
LMJ.RY0402.049544_2	LMJ.RY0402.049544	3'UTR	95	5.5
LMJ.RY0402.060768_1	LMJ.RY0402.060768	3'UTR	95	5.5
LMJ.RY0402.060768_2	LMJ.RY0402.060768	3'UTR	95	5.5
LMJ.RY0402.092000_1	LMJ.RY0402.092000	3'UTR	73	5.5
LMJ.RY0402.092036_1	LMJ.RY0402.092036	intron	95	5.5
LMJ.RY0402.130935_1	LMJ.RY0402.130935	3'UTR	95	5.5
LMJ.RY0402.130935_2	LMJ.RY0402.130935	3'UTR	95	5.5
LMJ.RY0402.132321_2	LMJ.RY0402.132321	intron	73	5.5
LMJ.RY0402.150912_1	LMJ.RY0402.150912	intron	58	5.5
LMJ.RY0402.167849_1	LMJ.RY0402.167849	3'UTR	95	5.5
LMJ.RY0402.167849_2	LMJ.RY0402.167849	3'UTR	95	5.5
LMJ.RY0402.168204_1	LMJ.RY0402.168204	intron	73	5.5
LMJ.RY0402.191469_1	LMJ.RY0402.191469	3'UTR	73	5.5
LMJ.RY0402.224542_1	LMJ.RY0402.224542	3'UTR	73	5.5
LMJ.RY0402.254304_1	LMJ.RY0402.254304	3'UTR	73	5.5

Gene Annotations

PFAM:	PF00957, PF13774
PANTHER:	PTHR21136 PTHR21136:SF4
KEGG_ec:
KEGG_orthology:
KOG:	KOG0859
Gene ontology terms::	GO:0006810, GO:0016021, GO:0016192
Best arabidopsis TAIR name:	AT3G54300.1
Best arabidopsis TAIR symbol:	ATVAMP727,VAMP727
Best arabidopsis TAIR defline:	vesicle-associated membrane protein 727
Phytozome Locus Page

Phenotypes

Our phenotype screens did not find statistically significant results for this gene.