Insertion junction: LMJ.RY0402.132321_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.132321
Chromosome:chromosome 4
Location:2951964
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre04.g224750 VAM1,VAMP1,VAMP71 Endosomal R-SNARE protein, Vamp7/Nyv1-family (R.III); (1 of 3) PTHR21136//PTHR21136:SF4 - SNARE PROTEINS // N-SYNAPTOBREVIN, ISOFORM J intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCCAGCCAGCAATCCGCCGAACGACTCTG
Internal bar code:GGTAATATATCTATAGTCGTTC

Confirmation - LEAP-Seq

LEAP-Seq distance:499
LEAP-Seq percent confirming:99.1624
LEAP-Seq n confirming:11720
LEAP-Seq n nonconfirming:99
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:GGGATAGAGGGTTGTGAGCA
Suggested primer 2:GAGAGCTGTGCTGGCTTCTT