Insertion junction: LMJ.RY0402.224542_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.224542
Chromosome:chromosome 4
Location:2954388
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre04.g224750 VAM1,VAMP1,VAMP71 Endosomal R-SNARE protein, Vamp7/Nyv1-family (R.III); (1 of 3) PTHR21136//PTHR21136:SF4 - SNARE PROTEINS // N-SYNAPTOBREVIN, ISOFORM J 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCCTTTGAAAGAGCCTCATCCGCACCAGT
Internal bar code:AGGACGTTTAAAAATCAGGTAC

Confirmation - LEAP-Seq

LEAP-Seq distance:646
LEAP-Seq percent confirming:98.5179
LEAP-Seq n confirming:2260
LEAP-Seq n nonconfirming:34
LEAP-Seq n unique pos:86

Suggested primers for confirmation by PCR

Suggested primer 1:ACCTCTCGGAACATTCATGC
Suggested primer 2:AAAACGGGCATTGAGACAAC