Insertion junction: LMJ.RY0402.150912_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.150912
Chromosome:chromosome 4
Location:2953900
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre04.g224750 VAM1,VAMP1,VAMP71 Endosomal R-SNARE protein, Vamp7/Nyv1-family (R.III); (1 of 3) PTHR21136//PTHR21136:SF4 - SNARE PROTEINS // N-SYNAPTOBREVIN, ISOFORM J intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACTCACTTGCAGTTCTGCCACCACATCTT
Internal bar code:GCTGTGTCGTTTAGAAGGTAAC

Confirmation - LEAP-Seq

LEAP-Seq distance:447
LEAP-Seq percent confirming:84.898
LEAP-Seq n confirming:416
LEAP-Seq n nonconfirming:74
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:CAAGTGCGGGGTCTTACATT
Suggested primer 2:GGTGACGATGTGGCCTAAGT