Insertion junction: CLIP2.053085_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.053085
Chromosome:chromosome 11
Location:4220789
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g481750 GAS30 (1 of 24) IPR003882//IPR024616 - Pistil-specific extensin-like protein // Pherophorin; Hydroxyproline-rich glycoprotein, stress-induced intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGGGCTGGTGACTGCGCCCCCCCCCTCCCCCCTCTTGCACCGCGGGCGG
Internal bar code:GATTTGTTTTGTAGGGTATTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:566
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:CCAGAGCAATGCAGACCTCA
Suggested primer 2:CCGACACTTAAATGCTCGCG