| Common name: | GAS30 |
| Defline: | (1 of 24) IPR003882//IPR024616 - Pistil-specific extensin-like protein // Pherophorin; Hydroxyproline-rich glycoprotein, stress-induced |
| Description: | Belongs to the large pherophorin-family, a family of extracellular matrix glycoproteins (cell wall glycoproteins) with a central hydroxyproline-rich (HR) domain. The mRNA is up-regulated in gametes, in zygotes, by agglutination/cAMP treatment, by osmotic stress and by cell wall removal [PMID: 16183845]. Closely linked to GAS28. Independently sequenced: DQ017907. |
| Synonyms: | GAS30,g11961.t1,Cre11.g481750.t1.1 |
| Chromosome: | chromosome 11 |
We did not create a plasmid for this gene.
We did not determine any protein-protein interactions for this gene.
| Insertion Junction | Mutant Strain | Insertion Junction Feature | Confidence (%) | Genome Version |
|---|---|---|---|---|
| CLIP2.053085_1 | CLIP2.053085 | intron | 80 | 6.1 |
| CLIP2.053085_2 | CLIP2.053085 | intron | 80 | 6.1 |
| CLIP2.055410_1 | CLIP2.055410 | intron | 80 | 6.1 |
| CLIP2.066670_1 | CLIP2.066670 | CDS | 63 | 6.1 |
| CLIP2.068470_1 | CLIP2.068470 | 5'UTR | 80 | 6.1 |
| CLIP2.068470_2 | CLIP2.068470 | 5'UTR | 80 | 6.1 |
| CLIP2.073437_1 | CLIP2.073437 | 3'UTR | 63 | 6.1 |
| LMJ.RY0402.050633_1 | LMJ.RY0402.050633 | 3'UTR | 73 | 5.5 |
| LMJ.RY0402.158318_1 | LMJ.RY0402.158318 | 3'UTR | 95 | 5.5 |
| LMJ.RY0402.158318_2 | LMJ.RY0402.158318 | 3'UTR | 95 | 5.5 |
| LMJ.RY0402.163898_1 | LMJ.RY0402.163898 | 3'UTR | 95 | 5.5 |
| LMJ.RY0402.163898_2 | LMJ.RY0402.163898 | 3'UTR | 95 | 5.5 |
| LMJ.RY0402.209178_1 | LMJ.RY0402.209178 | 5'UTR | 95 | 5.5 |
| LMJ.RY0402.209178_2 | LMJ.RY0402.209178 | 5'UTR | 95 | 5.5 |
| LMJ.RY0402.212641_2 | LMJ.RY0402.212641 | 3'UTR | 73 | 5.5 |
| PFAM: | PF12499 |
| PANTHER: | |
| KEGG_ec: | |
| KEGG_orthology: | |
| KOG: | |
| Gene ontology terms:: | GO:0005199 |
| Best arabidopsis TAIR name: | |
| Best arabidopsis TAIR symbol: | |
| Best arabidopsis TAIR defline: | |
| Phytozome Locus Page |
Our phenotype screens did not find statistically significant results for this gene.