Insertion junction: LMJ.RY0402.163898_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.163898
Chromosome:chromosome 11
Location:3572180
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre11.g481750 GAS30 (1 of 24) IPR003882//IPR024616 - Pistil-specific extensin-like protein // Pherophorin; Hydroxyproline-rich glycoprotein, stress-induced 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCCTCTCACATGTGACACGTGTGCAAGTC
Internal bar code:CAGAGTGCCGGCGGGCCGGCGC

Confirmation - LEAP-Seq

LEAP-Seq distance:956
LEAP-Seq percent confirming:99.4903
LEAP-Seq n confirming:20690
LEAP-Seq n nonconfirming:106
LEAP-Seq n unique pos:119

Suggested primers for confirmation by PCR

Suggested primer 1:ATTGCTAGGCACCTGGTTTG
Suggested primer 2:ATCTGCTTCAACGTGGCTCT