Insertion junction: LMJ.RY0402.163898_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.163898
Chromosome:chromosome 11
Location:3572177
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre11.g481750 GAS30 (1 of 24) IPR003882//IPR024616 - Pistil-specific extensin-like protein // Pherophorin; Hydroxyproline-rich glycoprotein, stress-induced 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCTACATGGCGATTCATCAGTATTGTTAG
Internal bar code:TCCGCCCCGCAGGAAAAAGTCA

Confirmation - LEAP-Seq

LEAP-Seq distance:685
LEAP-Seq percent confirming:94.518
LEAP-Seq n confirming:56294
LEAP-Seq n nonconfirming:3265
LEAP-Seq n unique pos:212

Suggested primers for confirmation by PCR

Suggested primer 1:ATCTGCTTCAACGTGGCTCT
Suggested primer 2:ATTGCTAGGCACCTGGTTTG