Insertion junction: CLIP2.073437_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.073437
Chromosome:chromosome 11
Location:4218974
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre11.g481750 GAS30 (1 of 24) IPR003882//IPR024616 - Pistil-specific extensin-like protein // Pherophorin; Hydroxyproline-rich glycoprotein, stress-induced 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGCTGAGAGGTGTGCTGTGTGGGCCCCTGTGCTGTTTCGGACGCTGCAC
Internal bar code:CGAACGTAACTTGTTGATTCGC

Confirmation - LEAP-Seq

LEAP-Seq distance:232
LEAP-Seq percent confirming:5.88235
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:16
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:GGCTGTTGACAACTGTGCTG
Suggested primer 2:AGTGCCTCCTGATGAGCAAC