Insertion junction: CLIP2.053086_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.053086
Chromosome:chromosome 11
Location:3883750
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g479750 SRP54,cpSRP54,SRP54L Chloroplast SRP54; (1 of 1) PTHR11564:SF7 - SIGNAL RECOGNITION PARTICLE 54 KDA PROTEIN, CHLOROPLASTIC CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGGTGCCCAGGTGAGACGGCCTCCCGAGCCTTCTGGACCTCGGGGAGGTA
Internal bar code:TAAGGATTGTCTCCCTAGTCTT

Confirmation - LEAP-Seq

LEAP-Seq distance:948
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:33
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:33

Suggested primers for confirmation by PCR

Suggested primer 1:GCAATAGATGGGCGTGCATG
Suggested primer 2:AGCCTAGGGACGTGTATGGT