Gene: Cre11.g479750

Overview

Common name:	SRP54,cpSRP54,SRP54L
Defline:	Chloroplast SRP54; (1 of 1) PTHR11564:SF7 - SIGNAL RECOGNITION PARTICLE 54 KDA PROTEIN, CHLOROPLASTIC
Description:	Expressed Protein. Similar to the Chloroplast SRP54 component of Signal Recognition particle, called FFC (Fifty-Four-Chloroplast Homologue) in land plants, almost identical to gb: AAK12834.
Synonyms:	Cre11.g479750.t1.1,SRP54,cpSRP54,g11909.t1
Chromosome:	chromosome 11

Protein Localization

We did not create a plasmid for this gene.

Protein-Protein Interactions

We did not determine any protein-protein interactions for this gene.

Mutant Strains

Insertion Junction	Mutant Strain	Insertion Junction Feature	Confidence (%)	Genome Version
CLIP2.031600_1	CLIP2.031600	intron	80	6.1
CLIP2.031600_2	CLIP2.031600	intron	80	6.1
CLIP2.033450_1	CLIP2.033450	CDS	80	6.1
CLIP2.033450_2	CLIP2.033450	CDS	80	6.1
CLIP2.046372_1	CLIP2.046372	intron	80	6.1
CLIP2.046372_2	CLIP2.046372	intron	80	6.1
CLIP2.048828_2	CLIP2.048828	CDS	63	6.1
CLIP2.050407_1	CLIP2.050407	intron	80	6.1
CLIP2.050407_2	CLIP2.050407	intron	80	6.1
CLIP2.053086_1	CLIP2.053086	CDS	80	6.1
CLIP2.053086_2	CLIP2.053086	CDS	80	6.1
CLIP2.066571_2	CLIP2.066571	intron	80	6.1
LMJ.RY0402.048450_1	LMJ.RY0402.048450	3'UTR	58	5.5
LMJ.RY0402.102095_2	LMJ.RY0402.102095	intron	58	5.5
LMJ.RY0402.143450_1	LMJ.RY0402.143450	intron	73	5.5
LMJ.RY0402.183922_1	LMJ.RY0402.183922	intron	95	5.5
LMJ.RY0402.183922_2	LMJ.RY0402.183922	intron	95	5.5
LMJ.RY0402.210873_1	LMJ.RY0402.210873	3'UTR	73	5.5
LMJ.RY0402.219850_1	LMJ.RY0402.219850	intron	95	5.5
LMJ.RY0402.219850_2	LMJ.RY0402.219850	intron	95	5.5
LMJ.RY0402.237719_1	LMJ.RY0402.237719	3'UTR	58	5.5
LMJ.RY0402.244955_1	LMJ.RY0402.244955	intron	95	5.5
LMJ.RY0402.244955_2	LMJ.RY0402.244955	intron	95	5.5
LMJ.RY0402.245093_1	LMJ.RY0402.245093	intron	73	5.5

Gene Annotations

PFAM:	PF00448, PF02881, PF02978
PANTHER:	PTHR11564 PTHR11564:SF7
KEGG_ec:	EC:3.6.5.4
KEGG_orthology:	K03106
KOG:	KOG0780
Gene ontology terms::	GO:0003924, GO:0005525, GO:0006614, GO:0008312, GO:0048500
Best arabidopsis TAIR name:	AT5G03940
Best arabidopsis TAIR symbol:	54CP,CPSRP54,FFC,SRP54CP
Best arabidopsis TAIR defline:	chloroplast signal recognition particle 54 kDa subunit
Phytozome Locus Page

Phenotypes

Mutants in this gene exhibit a phenotype under the following conditions:

LAT035F03, screen 1 of 1 ( 95% confidence (FDR = 0.044))

Note: FDR indicates the likelihood that a particular genotype-phenotype relationship is incorrect. Not all mutants in a particular gene show the same phenotype. Please see the mutant pages for each mutant's phenotypes. Complementation is needed to definitively prove a genotype-phenotype link. These data are from a pooled phenotyping experiment.

If you reference the phenotypic data above in a manuscript, please cite: Fauser et al. 2022 Nature Genetics.