Insertion junction: CLIP2.053167_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.053167
Chromosome:chromosome 1
Location:76018
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g000500 AXL5,ERR3 Arabinose chain extension enzyme like protein 5; (1 of 6) PTHR10994//PTHR10994:SF61 - RETICULON // RETICULON-LIKE PROTEIN intron
lncRNA_TCONS_00247596 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGTGCCGGTGTTCGTGCAGCTGTCGAAGTCGGCACTGCCGGACCCCGTCA
Internal bar code:CACGCCCGACATCAACTTATCA

Confirmation - LEAP-Seq

LEAP-Seq distance:2560
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:97
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:97

Suggested primers for confirmation by PCR

Suggested primer 1:TGTCTCTCCTGCAGTTGCTG
Suggested primer 2:CAACCAGCCAGCAACTTGTC