Insertion junction: CLIP2.053353_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.053353
Chromosome:chromosome 6
Location:2713774
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g270850 SRH12 (1 of 1) K10841 - DNA excision repair protein ERCC-6 (ERCC6, CSB, RAD26); SNF2-related DNA/RNA helicase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACCCTGGTCCGACCGATACCTTGCCGGGCGACAACCACGTGCGCGCACA
Internal bar code:TTTTTATGGCGGAGCATATGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:878
LEAP-Seq percent confirming:50.0
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:14
LEAP-Seq n unique pos:28

Suggested primers for confirmation by PCR

Suggested primer 1:CAGGGTGATCTCCGAATCCG
Suggested primer 2:GCATACTGGGGGACGAGATG