Insertion junction: CLIP2.053554_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.053554
Chromosome:chromosome 12
Location:7666258
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g555200 (1 of 1) PF09786 - Cytochrome B561, N terminal (CytochromB561_N) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTCACCCCTGCGTTTCTTAAGCGTGAGCCCCGCATAGAGCGTGTCCCTC
Internal bar code:TCGACGCGGCCCTGCTCGGTAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1151
LEAP-Seq percent confirming:36.9231
LEAP-Seq n confirming:24
LEAP-Seq n nonconfirming:41
LEAP-Seq n unique pos:65

Suggested primers for confirmation by PCR

Suggested primer 1:CAAGGCCTACAGTCACAGCA
Suggested primer 2:CAACAACACTGTCAGCACGG