Insertion junction: CLIP2.053595_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.053595
Chromosome:chromosome 2
Location:825778
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g078750 PUS3 RNA pseudouridine synthase; (1 of 1) K15452 - tRNA pseudouridine synthase 2 [EC:5.4.99.-] (PUS2) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGACCGTCCCGAATTCCCGCCAACGTGCTGACGTCCGTCGCCCCTACCC
Internal bar code:GGCAGGGGAAAACCCGCGCGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:231
LEAP-Seq percent confirming:1.19048
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:83
LEAP-Seq n unique pos:84

Suggested primers for confirmation by PCR

Suggested primer 1:TGTTACAACAGGGACGTCGG
Suggested primer 2:CACGCACACACTTCACACAG