Insertion junction: CLIP2.053816_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.053816
Chromosome:chromosome 9
Location:795990
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g403900 FAP294 (1 of 5) PF13391 - HNH endonuclease (HNH_2); Coiled-Coil Flagellar Associated Protein 294 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCACGCTACCAGGCAAGGGGTCGTTTTTTTCCCGCGACCCTGAAGCTGC
Internal bar code:CGGCGTAGAGCGCCAAAGTTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:3587
LEAP-Seq percent confirming:91.3043
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:ACTGCAGGTGTTTAGTCCGG
Suggested primer 2:CATTCTGGACCGGAAAGGCT