Insertion junction: CLIP2.053938_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.053938
Chromosome:chromosome 3
Location:1961394
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g155450 (1 of 3) PF01167 - Tub family (Tub) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGCTGGCTACCCGGTCAGCAGCCCGCCCAGCCCGCTGATTGCGTTGGAG
Internal bar code:AAGTAAGATCGAAGGTTATCGAC

Confirmation - LEAP-Seq

LEAP-Seq distance:678
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:GACGCCACGCCATATCAAAC
Suggested primer 2:ACATCCGCTGCAGTCACTAC