Insertion junction: CLIP2.053955_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.053955
Chromosome:chromosome 10
Location:2957491
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g440200 SMC5B (1 of 2) PTHR19306:SF1 - STRUCTURAL MAINTENANCE OF CHROMOSOMES PROTEIN 5; Structural Maintenance of Chromosomes protein CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGGCCGGTGGTCGGGCCCATCGGCCTGGAGATGACGGTGGCGCCGCCGC
Internal bar code:GATATCAATGACGGCATTTATG

Confirmation - LEAP-Seq

LEAP-Seq distance:3787
LEAP-Seq percent confirming:28.3784
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:53
LEAP-Seq n unique pos:74

Suggested primers for confirmation by PCR

Suggested primer 1:GCGGGTGCTTTGTCATTTGT
Suggested primer 2:AGGACATCCACAAGCTGAGC