Insertion junction: CLIP2.054202_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.054202
Chromosome:chromosome 12
Location:3145943
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g500600 VMA21 (1 of 1) PF09446 - VMA21-like domain (VMA21); vacuolar ATPase assembly factor CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAAACAGCATGCCACCTTCCGCGACGGCCGGAGGCAGCCTGCAGAGACCG
Internal bar code:GTAGCGTTTCCACGAAGTGACG

Confirmation - LEAP-Seq

LEAP-Seq distance:2436
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:60
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:60

Suggested primers for confirmation by PCR

Suggested primer 1:GCAACCCGTAACCAACCAAC
Suggested primer 2:AATTTTGTTGGCGGTGAGGC