Insertion junction: CLIP2.054326_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.054326
Chromosome:chromosome 9
Location:4471962
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g400812 (1 of 2) PF12325 - TATA element modulatory factor 1 TATA binding (TMF_TATA_bd) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTATAGGACCGCTTAAACACCCCCATAAATGATCAATCAGGCCCAGCAGT
Internal bar code:GGGCAGATCTATTGGTAGAGAC

Confirmation - LEAP-Seq

LEAP-Seq distance:1388
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:AAAAGGAAACGAAAGCCCGC
Suggested primer 2:GCCGCTGTAACAAACAACGT